Slot: contam_screen_param

Specific parameters used in the decontamination sofware, such as reference database, coverage, and kmers. Combinations of these parameters may also be used, i.e. kmer and coverage, or reference database and kmer

URI: mixs.vocab:contam_screen_param

Domain and Range

None → _0..1 contam_screen_param_enum

Parents

• is_a: sequencing field

Children

• MIMAG➞contam_screen_param
• MISAG➞contam_screen_param

Used by

• Core

Other properties

Aliases:		contamination screening parameters
Mappings:		MIXS:0000073
Comments:		Expected value: enumeration;value or name
		Position: 72.0
Examples:		Example(value='kmer', description=None)
Exact Mappings:		MIGS: