Slot: geo_loc_name
The geographical origin of the sample as defined by the country or sea name followed by specific region name. Country or sea names should be chosen from the INSDC country list (http://insdc.org/country.html), or the GAZ ontology (http://purl.bioontology.org/ontology/GAZ)
Domain and Range
None → 0..1 String
Parents
- is_a: environment field
Children
- ME➞geo_loc_name
- MIGS bacteria➞geo_loc_name
- MIGS eukaryote➞geo_loc_name
- MIGS org➞geo_loc_name
- MIGS plant➞geo_loc_name
- MIGS virus➞geo_loc_name
- MIMAG➞geo_loc_name
- MIMARKS specimen➞geo_loc_name
- MIMARKS survey➞geo_loc_name
- MISAG➞geo_loc_name
- MIUVIG➞geo_loc_name
Used by
- Air
- AirME
- AirMIGSBacteria
- AirMIGSEukaryote
- AirMIGSOrg
- AirMIGSPlant
- AirMIGSVirus
- AirMIMAG
- AirMIMARKSSpecimen
- AirMIMARKSSurvey
- AirMISAG
- AirMIUVIG
- BuiltEnvironment
- BuiltEnvironmentME
- BuiltEnvironmentMIGSBacteria
- BuiltEnvironmentMIGSEukaryote
- BuiltEnvironmentMIGSOrg
- BuiltEnvironmentMIGSPlant
- BuiltEnvironmentMIGSVirus
- BuiltEnvironmentMIMAG
- BuiltEnvironmentMIMARKSSpecimen
- BuiltEnvironmentMIMARKSSurvey
- BuiltEnvironmentMISAG
- BuiltEnvironmentMIUVIG
- Core
- Host-associated
- Host-associatedME
- Host-associatedMIGSBacteria
- Host-associatedMIGSEukaryote
- Host-associatedMIGSOrg
- Host-associatedMIGSPlant
- Host-associatedMIGSVirus
- Host-associatedMIMAG
- Host-associatedMIMARKSSpecimen
- Host-associatedMIMARKSSurvey
- Host-associatedMISAG
- Host-associatedMIUVIG
- Human-associated
- Human-associatedME
- Human-associatedMIGSBacteria
- Human-associatedMIGSEukaryote
- Human-associatedMIGSOrg
- Human-associatedMIGSPlant
- Human-associatedMIGSVirus
- Human-associatedMIMAG
- Human-associatedMIMARKSSpecimen
- Human-associatedMIMARKSSurvey
- Human-associatedMISAG
- Human-associatedMIUVIG
- Human-gut
- Human-gutME
- Human-gutMIGSBacteria
- Human-gutMIGSEukaryote
- Human-gutMIGSOrg
- Human-gutMIGSPlant
- Human-gutMIGSVirus
- Human-gutMIMAG
- Human-gutMIMARKSSpecimen
- Human-gutMIMARKSSurvey
- Human-gutMISAG
- Human-gutMIUVIG
- Human-oral
- Human-oralME
- Human-oralMIGSBacteria
- Human-oralMIGSEukaryote
- Human-oralMIGSOrg
- Human-oralMIGSPlant
- Human-oralMIGSVirus
- Human-oralMIMAG
- Human-oralMIMARKSSpecimen
- Human-oralMIMARKSSurvey
- Human-oralMISAG
- Human-oralMIUVIG
- Human-skin
- Human-skinME
- Human-skinMIGSBacteria
- Human-skinMIGSEukaryote
- Human-skinMIGSOrg
- Human-skinMIGSPlant
- Human-skinMIGSVirus
- Human-skinMIMAG
- Human-skinMIMARKSSpecimen
- Human-skinMIMARKSSurvey
- Human-skinMISAG
- Human-skinMIUVIG
- Human-vaginal
- Human-vaginalME
- Human-vaginalMIGSBacteria
- Human-vaginalMIGSEukaryote
- Human-vaginalMIGSOrg
- Human-vaginalMIGSPlant
- Human-vaginalMIGSVirus
- Human-vaginalMIMAG
- Human-vaginalMIMARKSSpecimen
- Human-vaginalMIMARKSSurvey
- Human-vaginalMISAG
- Human-vaginalMIUVIG
- HydrocarbonResources-cores
- HydrocarbonResources-coresME
- HydrocarbonResources-coresMIGSBacteria
- HydrocarbonResources-coresMIGSEukaryote
- HydrocarbonResources-coresMIGSOrg
- HydrocarbonResources-coresMIGSPlant
- HydrocarbonResources-coresMIGSVirus
- HydrocarbonResources-coresMIMAG
- HydrocarbonResources-coresMIMARKSSpecimen
- HydrocarbonResources-coresMIMARKSSurvey
- HydrocarbonResources-coresMISAG
- HydrocarbonResources-coresMIUVIG
- HydrocarbonResources-fluidsSwabs
- HydrocarbonResources-fluidsSwabsME
- HydrocarbonResources-fluidsSwabsMIGSBacteria
- HydrocarbonResources-fluidsSwabsMIGSEukaryote
- HydrocarbonResources-fluidsSwabsMIGSOrg
- HydrocarbonResources-fluidsSwabsMIGSPlant
- HydrocarbonResources-fluidsSwabsMIGSVirus
- HydrocarbonResources-fluidsSwabsMIMAG
- HydrocarbonResources-fluidsSwabsMIMARKSSpecimen
- HydrocarbonResources-fluidsSwabsMIMARKSSurvey
- HydrocarbonResources-fluidsSwabsMISAG
- HydrocarbonResources-fluidsSwabsMIUVIG
- MicrobialMatBiofilm
- MicrobialMatBiofilmME
- MicrobialMatBiofilmMIGSBacteria
- MicrobialMatBiofilmMIGSEukaryote
- MicrobialMatBiofilmMIGSOrg
- MicrobialMatBiofilmMIGSPlant
- MicrobialMatBiofilmMIGSVirus
- MicrobialMatBiofilmMIMAG
- MicrobialMatBiofilmMIMARKSSpecimen
- MicrobialMatBiofilmMIMARKSSurvey
- MicrobialMatBiofilmMISAG
- MicrobialMatBiofilmMIUVIG
- MiscellaneousNaturalOrArtificialEnvironment
- MiscellaneousNaturalOrArtificialEnvironmentME
- MiscellaneousNaturalOrArtificialEnvironmentMIGSBacteria
- MiscellaneousNaturalOrArtificialEnvironmentMIGSEukaryote
- MiscellaneousNaturalOrArtificialEnvironmentMIGSOrg
- MiscellaneousNaturalOrArtificialEnvironmentMIGSPlant
- MiscellaneousNaturalOrArtificialEnvironmentMIGSVirus
- MiscellaneousNaturalOrArtificialEnvironmentMIMAG
- MiscellaneousNaturalOrArtificialEnvironmentMIMARKSSpecimen
- MiscellaneousNaturalOrArtificialEnvironmentMIMARKSSurvey
- MiscellaneousNaturalOrArtificialEnvironmentMISAG
- MiscellaneousNaturalOrArtificialEnvironmentMIUVIG
- Plant-associated
- Plant-associatedME
- Plant-associatedMIGSBacteria
- Plant-associatedMIGSEukaryote
- Plant-associatedMIGSOrg
- Plant-associatedMIGSPlant
- Plant-associatedMIGSVirus
- Plant-associatedMIMAG
- Plant-associatedMIMARKSSpecimen
- Plant-associatedMIMARKSSurvey
- Plant-associatedMISAG
- Plant-associatedMIUVIG
- Sediment
- SedimentME
- SedimentMIGSBacteria
- SedimentMIGSEukaryote
- SedimentMIGSOrg
- SedimentMIGSPlant
- SedimentMIGSVirus
- SedimentMIMAG
- SedimentMIMARKSSpecimen
- SedimentMIMARKSSurvey
- SedimentMISAG
- SedimentMIUVIG
- Soil
- SoilME
- SoilMIGSBacteria
- SoilMIGSEukaryote
- SoilMIGSOrg
- SoilMIGSPlant
- SoilMIGSVirus
- SoilMIMAG
- SoilMIMARKSSpecimen
- SoilMIMARKSSurvey
- SoilMISAG
- SoilMIUVIG
- WastewaterSludge
- WastewaterSludgeME
- WastewaterSludgeMIGSBacteria
- WastewaterSludgeMIGSEukaryote
- WastewaterSludgeMIGSOrg
- WastewaterSludgeMIGSPlant
- WastewaterSludgeMIGSVirus
- WastewaterSludgeMIMAG
- WastewaterSludgeMIMARKSSpecimen
- WastewaterSludgeMIMARKSSurvey
- WastewaterSludgeMISAG
- WastewaterSludgeMIUVIG
- Water
- WaterME
- WaterMIGSBacteria
- WaterMIGSEukaryote
- WaterMIGSOrg
- WaterMIGSPlant
- WaterMIGSVirus
- WaterMIMAG
- WaterMIMARKSSpecimen
- WaterMIMARKSSurvey
- WaterMISAG
- WaterMIUVIG
Other properties
| Aliases: | geographic location (country and/or sea,region) | |
| Mappings: | MIXS:0000010 | |
| Comments: | Expected value: country or sea name (INSDC or GAZ): region(GAZ), specific location name | |
| Position: 8.0 | ||
| Examples: | Example(value='USA: Maryland, Bethesda', description=None) | |
| See also: | https://github.com/GenomicsStandardsConsortium/mixs/issues/79 | |
| Exact Mappings: | MIGS:MIGS-4 |