Slot: source_mat_id

A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular digital record of a material sample) used for extracting nucleic acids, and subsequent sequencing. The identifier can refer either to the original material collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher, /bio_material, or /culture_collection may or may not share the same value as the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both the specimen voucher and sampled tissue with the same identifier. However, the /culture_collection qualifier may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id would refer to an identifier from some derived culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2).

URI: mixs.vocab:source_mat_id

Domain and Range

None → _0..1 String

Parents

• is_a: nucleic acid sequence source field

Children

• ME➞source_mat_id
• MIGS bacteria➞source_mat_id
• MIGS eukaryote➞source_mat_id
• MIGS org➞source_mat_id
• MIGS plant➞source_mat_id
• MIGS virus➞source_mat_id
• MIMAG➞source_mat_id
• MIMARKS specimen➞source_mat_id
• MIMARKS survey➞source_mat_id
• MISAG➞source_mat_id
• MIUVIG➞source_mat_id

Used by

• Core

Other properties

Aliases:		source material identifiers
Mappings:		MIXS:0000026
Comments:		Expected value: for cultures of microorganisms: identifiers for two culture collections; for other material a unique arbitrary identifer
		Position: 20.0
Examples:		Example(value='MPI012345', description=None)
See also:		https://github.com/GenomicsStandardsConsortium/mixs/issues/149
Exact Mappings:		MIGS:MIGS-13