Slot: tax_class
Method used for taxonomic classification, along with reference database used, classification rank, and thresholds used to classify new genomes
URI: mixs.vocab:tax_class
Domain and Range
None → 0..1 String
Parents
- is_a: sequencing field
Children
- ME➞tax_class
- MIGS bacteria➞tax_class
- MIGS eukaryote➞tax_class
- MIGS org➞tax_class
- MIGS plant➞tax_class
- MIGS virus➞tax_class
- MIMAG➞tax_class
- MISAG➞tax_class
- MIUVIG➞tax_class
Used by
Other properties
| Aliases: | taxonomic classification | |
| Mappings: | MIXS:0000064 | |
| Comments: | Expected value: classification method, database name, and other parameters | |
| Position: 62.0 | ||
| Examples: | Example(value='vConTACT vContact2 (references from NCBI RefSeq v83, genus rank classification, default parameters)', description=None) | |
| See also: | https://github.com/GenomicsStandardsConsortium/mixs/issues/152 | |
| Exact Mappings: | MIGS: |