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Class: AnnotationProperty

URI: owl:AnnotationProperty

Inheritance

Slots

Name Range Cardinality Description Info
shorthand string 0..* None .
domain string 0..* None .
range string 0..* None .
is_class_level boolean 0..1 None .
is_metadata_tag boolean 0..1 None .
has_exact_synonym label_type 0..* None .
has_narrow_synonym label_type 0..* None .
has_broad_synonym label_type 0..* None .
has_related_synonym label_type 0..* None .
alternative_term string 0..* None .
ISA_alternative_term string 0..* None .
IEDB_alternative_term string 0..* None .
editor_preferred_term string 0..* None .
OBO_foundry_unique_label string 0..* None .
deprecated boolean 0..1 None .
has_obsolescence_reason string 0..1 None .
term_replaced_by Any 0..1 None .
consider Any 0..* None .
has_alternative_id uriorcurie 0..* None .
excluded_from_QC_check Thing 0..1 None .
excluded_subClassOf Class 0..* None .
excluded_synonym string 0..* None .
should_conform_to Thing 0..1 None .
created_by string 0..1 None .
creation_date string 0..* None .
contributor Thing 0..* None .
creator string 0..* None .
created string 0..1 when the term came into being .
date string 0..* when the term was updated .
isDefinedBy Ontology 0..1 None .
editor_note narrative_text 0..* None .
term_editor string 0..* None .
definition_source string 0..* None .
ontology_term_requester string 0..1 None .
imported_from NamedIndividual 0..* None .
term_tracker_item string 0..* None .
broadMatch Property 0..* None .
closeMatch Property 0..* None .
exactMatch Property 0..* None .
narrowMatch Property 0..* None .
database_cross_reference CURIELiteral 0..* None .
has_obo_namespace string 0..* None .
category string 0..1 None .
in_subset Subset 0..* Maps an ontology element to a subset it belongs to .
conformsTo Thing 0..* None .
comment string 0..* None .
seeAlso Thing 0..* None .
image Thing 0..1 None .
example_of_usage string 0..* None .
curator_note string 0..* None .
has_curation_status string 0..1 None .
depicted_by string 0..* None .
page string 0..* None .
label label_type 0..1 recommended None .
definition narrative_text 0..* recommended None .
id uriorcurie 1..1 this maps to the URI in RDF .
type uriorcurie 0..* None .

Usages

used by used in type used
Axiom annotatedProperty range AnnotationProperty
Axiom has_synonym_type range AnnotationProperty

Identifier and Mapping Information

LinkML Specification

Direct

name: AnnotationProperty
from_schema: http://purl.obolibrary.org/obo/omo/schema
is_a: Property
slots:
- shorthand
class_uri: owl:AnnotationProperty

Induced

name: AnnotationProperty
from_schema: http://purl.obolibrary.org/obo/omo/schema
is_a: Property
attributes:
  shorthand:
    name: shorthand
    deprecated: deprecated oboInOwl property
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:shorthand
    multivalued: true
    alias: shorthand
    owner: AnnotationProperty
    range: string
  domain:
    name: domain
    todos:
    - restrict range
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: logical_predicate
    slot_uri: rdfs:domain
    multivalued: true
    alias: domain
    owner: AnnotationProperty
    range: string
  range:
    name: range
    todos:
    - restrict range
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: logical_predicate
    slot_uri: rdfs:range
    multivalued: true
    alias: range
    owner: AnnotationProperty
    range: string
  is_class_level:
    name: is_class_level
    deprecated: deprecated oboInOwl property
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:is_class_level
    alias: is_class_level
    owner: AnnotationProperty
    range: boolean
  is_metadata_tag:
    name: is_metadata_tag
    deprecated: deprecated oboInOwl property
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:is_metadata_tag
    alias: is_metadata_tag
    owner: AnnotationProperty
    range: boolean
  has_exact_synonym:
    name: has_exact_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: synonym
    slot_uri: oio:hasExactSynonym
    multivalued: true
    alias: has_exact_synonym
    owner: AnnotationProperty
    disjoint_with:
    - label
    range: label type
  has_narrow_synonym:
    name: has_narrow_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: synonym
    slot_uri: oio:hasNarrowSynonym
    multivalued: true
    alias: has_narrow_synonym
    owner: AnnotationProperty
    range: label type
  has_broad_synonym:
    name: has_broad_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: synonym
    slot_uri: oio:hasBroadSynonym
    multivalued: true
    alias: has_broad_synonym
    owner: AnnotationProperty
    range: label type
  has_related_synonym:
    name: has_related_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:hasRelatedSynonym
    multivalued: true
    alias: has_related_synonym
    owner: AnnotationProperty
    range: label type
  alternative_term:
    name: alternative_term
    exact_mappings:
    - skos:altLabel
    in_subset:
    - allotrope permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: IAO:0000118
    multivalued: true
    alias: alternative_term
    owner: AnnotationProperty
    range: string
  ISA_alternative_term:
    name: ISA_alternative_term
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: OBI:0001847
    multivalued: true
    alias: ISA_alternative_term
    owner: AnnotationProperty
    range: string
  IEDB_alternative_term:
    name: IEDB_alternative_term
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: OBI:9991118
    multivalued: true
    alias: IEDB_alternative_term
    owner: AnnotationProperty
    range: string
  editor_preferred_term:
    name: editor_preferred_term
    in_subset:
    - obi permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: IAO:0000111
    multivalued: true
    alias: editor_preferred_term
    owner: AnnotationProperty
    range: string
  OBO_foundry_unique_label:
    name: OBO_foundry_unique_label
    todos:
    - add uniquekey
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: IAO:0000589
    multivalued: true
    alias: OBO_foundry_unique_label
    owner: AnnotationProperty
    range: string
  deprecated:
    name: deprecated
    aliases:
    - is obsolete
    in_subset:
    - allotrope permitted profile
    - go permitted profile
    - obi permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: obsoletion_related_property
    slot_uri: owl:deprecated
    alias: deprecated
    owner: AnnotationProperty
    range: boolean
  has_obsolescence_reason:
    name: has_obsolescence_reason
    todos:
    - restrict range
    comments:
    - '{''RULE'': ''subject must be deprecated''}'
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: obsoletion_related_property
    slot_uri: IAO:0000231
    alias: has_obsolescence_reason
    owner: AnnotationProperty
    range: string
  term_replaced_by:
    name: term_replaced_by
    exact_mappings:
    - dcterms:isReplacedBy
    comments:
    - '{''RULE'': ''subject must be deprecated''}'
    in_subset:
    - go permitted profile
    - obi permitted profile
    - allotrope permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: obsoletion_related_property
    slot_uri: IAO:0100001
    alias: term_replaced_by
    owner: AnnotationProperty
    range: Any
  consider:
    name: consider
    comments:
    - '{''RULE'': ''subject must be deprecated''}'
    in_subset:
    - go permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: obsoletion_related_property
    slot_uri: oio:consider
    multivalued: true
    alias: consider
    owner: AnnotationProperty
    range: Any
  has_alternative_id:
    name: has_alternative_id
    comments:
    - '{''RULE'': ''object must be deprecated''}'
    in_subset:
    - go permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: obsoletion_related_property
    slot_uri: oio:hasAlternativeId
    multivalued: true
    alias: has_alternative_id
    owner: AnnotationProperty
    range: uriorcurie
  excluded_from_QC_check:
    name: excluded_from_QC_check
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: excluded_axiom
    alias: excluded_from_QC_check
    owner: AnnotationProperty
    range: Thing
  excluded_subClassOf:
    name: excluded_subClassOf
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: excluded_axiom
    multivalued: true
    alias: excluded_subClassOf
    owner: AnnotationProperty
    range: Class
  excluded_synonym:
    name: excluded_synonym
    exact_mappings:
    - skos:hiddenSynonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: excluded_axiom
    multivalued: true
    alias: excluded_synonym
    owner: AnnotationProperty
    range: string
  should_conform_to:
    name: should_conform_to
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: excluded_axiom
    alias: should_conform_to
    owner: AnnotationProperty
    range: Thing
  created_by:
    name: created_by
    deprecated: proposed obsoleted by OMO group 2022-04-12
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    deprecated_element_has_exact_replacement: creator
    is_a: provenance_property
    slot_uri: oio:created_by
    alias: created_by
    owner: AnnotationProperty
    range: string
  creation_date:
    name: creation_date
    deprecated: proposed obsoleted by OMO group 2022-04-12
    todos:
    - restrict range
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    deprecated_element_has_exact_replacement: created
    is_a: provenance_property
    slot_uri: oio:creation_date
    multivalued: true
    alias: creation_date
    owner: AnnotationProperty
    range: string
  contributor:
    name: contributor
    close_mappings:
    - prov:wasAttributedTo
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: dcterms:contributor
    multivalued: true
    alias: contributor
    owner: AnnotationProperty
    range: Thing
  creator:
    name: creator
    close_mappings:
    - prov:wasAttributedTo
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: dcterms:creator
    multivalued: true
    alias: creator
    owner: AnnotationProperty
    range: string
  created:
    name: created
    close_mappings:
    - pav:createdOn
    description: when the term came into being
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: dcterms:created
    multivalued: false
    alias: created
    owner: AnnotationProperty
    range: string
  date:
    name: date
    close_mappings:
    - pav:authoredOn
    description: when the term was updated
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: dcterms:date
    multivalued: true
    alias: date
    owner: AnnotationProperty
    range: string
  isDefinedBy:
    name: isDefinedBy
    close_mappings:
    - pav:importedFrom
    - dcterms:publisher
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: rdfs:isDefinedBy
    alias: isDefinedBy
    owner: AnnotationProperty
    range: Ontology
  editor_note:
    name: editor_note
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000116
    multivalued: true
    alias: editor_note
    owner: AnnotationProperty
    range: narrative text
  term_editor:
    name: term_editor
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000117
    multivalued: true
    alias: term_editor
    owner: AnnotationProperty
    range: string
  definition_source:
    name: definition_source
    todos:
    - restrict range
    in_subset:
    - obi permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000119
    multivalued: true
    alias: definition_source
    owner: AnnotationProperty
    range: string
  ontology_term_requester:
    name: ontology_term_requester
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000234
    alias: ontology_term_requester
    owner: AnnotationProperty
    range: string
  imported_from:
    name: imported_from
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000412
    multivalued: true
    alias: imported_from
    owner: AnnotationProperty
    range: NamedIndividual
  term_tracker_item:
    name: term_tracker_item
    todos:
    - restrict range
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000233
    multivalued: true
    alias: term_tracker_item
    owner: AnnotationProperty
    range: string
  broadMatch:
    name: broadMatch
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: match
    slot_uri: skos:broadMatch
    multivalued: true
    alias: broadMatch
    owner: AnnotationProperty
    range: Property
  closeMatch:
    name: closeMatch
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: match
    slot_uri: skos:closeMatch
    multivalued: true
    alias: closeMatch
    owner: AnnotationProperty
    range: Property
  exactMatch:
    name: exactMatch
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: match
    slot_uri: skos:exactMatch
    multivalued: true
    alias: exactMatch
    owner: AnnotationProperty
    range: Property
  narrowMatch:
    name: narrowMatch
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: match
    slot_uri: skos:narrowMatch
    multivalued: true
    alias: narrowMatch
    owner: AnnotationProperty
    range: Property
  database_cross_reference:
    name: database_cross_reference
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: match
    slot_uri: oio:hasDbXref
    multivalued: true
    alias: database_cross_reference
    owner: AnnotationProperty
    range: CURIELiteral
  has_obo_namespace:
    name: has_obo_namespace
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:hasOBONamespace
    multivalued: true
    alias: has_obo_namespace
    owner: AnnotationProperty
    range: string
  category:
    name: category
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: biolink:category
    alias: category
    owner: AnnotationProperty
    range: string
  in_subset:
    name: in_subset
    description: Maps an ontology element to a subset it belongs to
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:inSubset
    multivalued: true
    alias: in_subset
    owner: AnnotationProperty
    range: Subset
  conformsTo:
    name: conformsTo
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: dcterms:conformsTo
    multivalued: true
    alias: conformsTo
    owner: AnnotationProperty
    range: Thing
  comment:
    name: comment
    comments:
    - in obo format, a term cannot have more than one comment
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: rdfs:comment
    multivalued: true
    alias: comment
    owner: AnnotationProperty
    range: string
  seeAlso:
    name: seeAlso
    todos:
    - restrict range
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: rdfs:seeAlso
    multivalued: true
    alias: seeAlso
    owner: AnnotationProperty
    range: Thing
  image:
    name: image
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: sdo:image
    alias: image
    owner: AnnotationProperty
    range: Thing
  example_of_usage:
    name: example_of_usage
    exact_mappings:
    - skos:example
    in_subset:
    - allotrope permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: IAO:0000112
    multivalued: true
    alias: example_of_usage
    owner: AnnotationProperty
    range: string
  curator_note:
    name: curator_note
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: provenance_property
    slot_uri: IAO:0000232
    multivalued: true
    alias: curator_note
    owner: AnnotationProperty
    range: string
  has_curation_status:
    name: has_curation_status
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: IAO:0000114
    alias: has_curation_status
    owner: AnnotationProperty
    range: string
  depicted_by:
    name: depicted_by
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: foaf:depicted_by
    multivalued: true
    alias: depicted_by
    owner: AnnotationProperty
    range: string
  page:
    name: page
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: informative_property
    slot_uri: foaf:page
    multivalued: true
    alias: page
    owner: AnnotationProperty
    range: string
  label:
    name: label
    exact_mappings:
    - skos:prefLabel
    comments:
    - SHOULD follow OBO label guidelines
    - MUST be unique within an ontology
    - SHOULD be unique across OBO
    in_subset:
    - allotrope required profile
    - go required profile
    - obi required profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: core_property
    slot_uri: rdfs:label
    multivalued: false
    alias: label
    owner: AnnotationProperty
    range: label type
    recommended: true
  definition:
    name: definition
    exact_mappings:
    - skos:definition
    comments:
    - SHOULD be in Aristotelian (genus-differentia) form
    in_subset:
    - allotrope required profile
    - go required profile
    - obi required profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: core_property
    slot_uri: IAO:0000115
    multivalued: true
    alias: definition
    owner: AnnotationProperty
    range: narrative text
    recommended: true
  id:
    name: id
    description: this maps to the URI in RDF
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: core_property
    identifier: true
    alias: id
    owner: AnnotationProperty
    range: uriorcurie
    required: true
  type:
    name: type
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: logical_predicate
    slot_uri: rdf:type
    multivalued: true
    designates_type: true
    alias: type
    owner: AnnotationProperty
    range: uriorcurie
class_uri: owl:AnnotationProperty