Class: HasSynonyms

a mixin for a class whose members can have synonyms

NOTE: this is a mixin class intended to be used in combination with other classes, and not used directly

Inheritance

AnnotationPropertyMixin
- HasSynonyms

Slots

Name	Range	Cardinality	Description	Info
has_exact_synonym	label_type	0..*	None	.
has_narrow_synonym	label_type	0..*	None	.
has_broad_synonym	label_type	0..*	None	.
has_related_synonym	label_type	0..*	None	.
alternative_term	string	0..*	None	.
ISA_alternative_term	string	0..*	None	.
IEDB_alternative_term	string	0..*	None	.
editor_preferred_term	string	0..*	None	.
OBO_foundry_unique_label	string	0..*	None	.

Usages

Identifier and Mapping Information

LinkML Specification

Direct

name: HasSynonyms
description: a mixin for a class whose members can have synonyms
comments:
- the GO-style synonym model has four distinct scopes, with additional types as annotation
  axioms
- the OBI synonym model is to use alternative_term, or potentially a subproperty
from_schema: http://purl.obolibrary.org/obo/omo/schema
is_a: AnnotationPropertyMixin
mixin: true
slots:
- has_exact_synonym
- has_narrow_synonym
- has_broad_synonym
- has_related_synonym
- alternative_term
- ISA_alternative_term
- IEDB_alternative_term
- editor_preferred_term
- OBO_foundry_unique_label

Induced

name: HasSynonyms
description: a mixin for a class whose members can have synonyms
comments:
- the GO-style synonym model has four distinct scopes, with additional types as annotation
  axioms
- the OBI synonym model is to use alternative_term, or potentially a subproperty
from_schema: http://purl.obolibrary.org/obo/omo/schema
is_a: AnnotationPropertyMixin
mixin: true
attributes:
  has_exact_synonym:
    name: has_exact_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: synonym
    slot_uri: oio:hasExactSynonym
    multivalued: true
    alias: has_exact_synonym
    owner: HasSynonyms
    disjoint_with:
    - label
    range: label type
  has_narrow_synonym:
    name: has_narrow_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: synonym
    slot_uri: oio:hasNarrowSynonym
    multivalued: true
    alias: has_narrow_synonym
    owner: HasSynonyms
    range: label type
  has_broad_synonym:
    name: has_broad_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: synonym
    slot_uri: oio:hasBroadSynonym
    multivalued: true
    alias: has_broad_synonym
    owner: HasSynonyms
    range: label type
  has_related_synonym:
    name: has_related_synonym
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: oio:hasRelatedSynonym
    multivalued: true
    alias: has_related_synonym
    owner: HasSynonyms
    range: label type
  alternative_term:
    name: alternative_term
    exact_mappings:
    - skos:altLabel
    in_subset:
    - allotrope permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    slot_uri: IAO:0000118
    multivalued: true
    alias: alternative_term
    owner: HasSynonyms
    range: string
  ISA_alternative_term:
    name: ISA_alternative_term
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: OBI:0001847
    multivalued: true
    alias: ISA_alternative_term
    owner: HasSynonyms
    range: string
  IEDB_alternative_term:
    name: IEDB_alternative_term
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: OBI:9991118
    multivalued: true
    alias: IEDB_alternative_term
    owner: HasSynonyms
    range: string
  editor_preferred_term:
    name: editor_preferred_term
    in_subset:
    - obi permitted profile
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: IAO:0000111
    multivalued: true
    alias: editor_preferred_term
    owner: HasSynonyms
    range: string
  OBO_foundry_unique_label:
    name: OBO_foundry_unique_label
    todos:
    - add uniquekey
    from_schema: http://purl.obolibrary.org/obo/omo/schema
    is_a: alternative_term
    slot_uri: IAO:0000589
    multivalued: true
    alias: OBO_foundry_unique_label
    owner: HasSynonyms
    range: string