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Class: Organism

URI: gocam:Organism

classDiagram class Organism NamedEntity <|-- Organism Organism : id Organism : label

Inheritance

Slots

Name Cardinality and Range Description Inheritance
label 0..1
NONE		 NamedEntity
id 0..1
NONE		 NamedEntity

Usages

used by used in type used
GeneToReaction organism range Organism
MultiGeneToReaction organism range Organism
GoCamAnnotations organisms range Organism
GeneOrganismRelationship organism range Organism

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • NCBITaxon

Annotations

property value
annotators gilda:, sqlite:obo:ncbitaxon

Schema Source

  • from schema: http://w3id.org/linkml/ai/templates/gocam

Mappings

Mapping Type Mapped Value
self gocam:Organism
native gocam:Organism

LinkML Source

Direct

name: Organism
id_prefixes:
- NCBITaxon
annotations:
  annotators:
    tag: annotators
    value: gilda:, sqlite:obo:ncbitaxon
from_schema: http://w3id.org/linkml/ai/templates/gocam
rank: 1000
is_a: NamedEntity

Induced

name: Organism
id_prefixes:
- NCBITaxon
annotations:
  annotators:
    tag: annotators
    value: gilda:, sqlite:obo:ncbitaxon
from_schema: http://w3id.org/linkml/ai/templates/gocam
rank: 1000
is_a: NamedEntity
attributes:
  id:
    name: id
    annotations:
      prompt.skip:
        tag: prompt.skip
        value: 'true'
    from_schema: http://w3id.org/linkml/ai/templates/core
    rank: 1000
    identifier: true
    alias: id
    owner: Organism
    domain_of:
    - NamedEntity
    - Publication
    range: string
  label:
    name: label
    description: The label of the named thing
    from_schema: http://w3id.org/linkml/ai/templates/core
    rank: 1000
    alias: label
    owner: Organism
    domain_of:
    - NamedEntity
    - Recipe
    - Reaction
    - BiologicalProcess
    range: string